Sample failing
This dataset was not processed by the workflow as it did not meet the minimum bam coverage of 20.0x required.
At a glance
This report contains visualisations of statistics that can help in understanding the results from the wf-human-variation workflow. Each section contains different plots or tables, and in general the results are broken down by sample. You can quickly jump to an individual section with the links in the header bar.
Sample total reads
7671741
Sample read N50
29643 bp
Sample mean coverage
0.0x
Summary
| Metric | Value | Percentage |
|---|---|---|
| Reads | 7,671,741 |
|
| Unmapped reads | 0 |
|
| Bases | 139,119,987,732 |
|
Read statistics
This section displays the read statistics for the sample processed. A description of each plot is as follows:
Read quality: read quality (range cropped to 4-30) vs. the number of reads.
Read length: read length vs. the number of reads.
Base yield above read length: base yield above a given read length.
Accuracy: mapping accuracy (ranging from 0-100%) vs. the number of reads.
Coverage: coverage (proportion of read spanned by alignment) vs. the number of reads.
Depth of coverage
This section illustrates the depth of coverage of the reference genomes. The plot shows coverage vs. genomic position (note that the coordinates on the x-axis are the positions along the concatenated reference including all reference sequences in the respective reference file).